Ruth Gates

First Name:

Ruth

Last Name:

Gates

Team:

ECOGEM

Email: rgates@hawaii.edu

Institution: UH Manoa

Personal

Personal

Gender: Female

= Publicly Viewable

Publication

Gates R., X. Pochon. 2010. A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawai’i. Molecular Phylogenetics and Evolution 56(1): 492-497.. DOI:10.1016/j.ympev.2010.03.040 - Published
Gates R., J.L. Padilla-Gamino, R.R. Bidigare, D.J. Barshis, A. Alamaru, L. Hedouin, X. Hernandez-Pech, F. Kandel, S. Leon Soon, M.S. Roth, L.J. Rodrigues, A.A. Grottoli, C. Portocarrero, S.A. Wagenhauser, F. Buttler. 2013. Are all eggs created equal? A case study from the Hawaiian reef building coral Montipora capitata.. Coral Reefs 32: 137-152.. DOI:10.1007/s00338-012-0957-1 - Published
Toonen R., D. Wagner, R. Gates, X. Pochon, L. Irwin. 2011. Azooxanthellate? Most Hawaiian black corals contain Symbiodinium. Proceedings of the Royal Society B: Biological Sciences 278: 1323-1328.. DOI:10.1098/rspb.2010.1681 - Published
Gates R., M. Stat. 2011. Clade D Symbiodinium in scleractinian corals: a “nugget” of hope, a selfish opportunist, an ominous sign, or all of the above?. Journal of Marine Biology 2011: Article ID: 730715.. DOI:10.1155/2011/730715 - Published
Gates R., X. Pochon, M. Stat, M. Takabayashi, D. Logan, L. Chasqui, L. Jones. 2010. Comparison of endosymbiotic and free-living Symbiodinium (Dinophyceae) diversity in a Hawaiian reef environment. Journal of Phycology 46(1): 53-65.. DOI:10.1111/j.1529-8817.2009.00797.x - Published
Gates R., E. Sogin, D.M. Yost, L.H. Wang, T.Y. Fan, C.S. Chen, R.W. Lee. Compositional diversity in skeletal architecture influences biological heterogeneity and Symbiodinium habitat in corals. Proceedings of the National Academy of Sciences - Submitted - Under Review
Gates R., T. Krueger. 2012. Cultivating endosymbionts — Host environmental mimics support the survival of Symbiodinium C15 ex hospite. Journal of Experimental Biology and Ecology 413: 169-176.. DOI:10.1016/j.jembe.2011.12.002 - Published
Gates R., L. Hedouin, M. Metian. 2011. Ecotoxicological approach for assessing the contamination of a Hawaiian coral reef ecosystem (Honolua Bay, Maui) by metals and a metalloid. Marine Environmental Research 71(3): 149-161.. DOI:10.1016/j.marenvres.2010.12.006 - Published
Gates R., H. Putnam, M. Stat, X. Pochon. 2012. Endosymbiotic flexibility associates with environmental sensitivity in scleractinian corals. Proceedings of the Royal Society London Series B 279: 4352-4361.. DOI:10.1098/rspb.2012.1454 - Published
Gates R., A.B. Mayfield, Y.Y. Hsiao, T.Y. Fan, and C.S. Chan. 2010. Evaluating the temporal stability of stress-activated protein kinase and cytoskeleton gene expression in the Pacific reef corals Pocillopora damicornis and Seriatopora hystrix.. Journal of Experimental Marine Biology and Ecology 395: 215-222.. DOI:10.1016/j.jembe.2010.09.007 - Published
Gates R., M.P. Lesser, M. Stat. Evolutionary ecology of coral symbioses with dinoflagellates: are all coral-dinoflagellate symbioses created equal?. Trends in Microbiology - Submitted - Under Review
Gates R., H.M. Putnam. Examining the synergistic impacts of ocean acidification and thermal stress on coastal reef organisms: experimental infrastructure and ecological context. Journal of Experimental Marine Biology and Ecology - Submitted - Under Review
Gates R., J.L. Padilla-Gamiño, T.M. Weatherby, R.G. Waller. 2011. Formation and structural organization of the egg-sperm bundle of the scleractinian coral Montipora capitata. Coral Reefs 30(2): 371-380.. DOI:10.1007/s00338-010-0700-8 - Published
Gates R., J.L. Padilla-Gamino, X. Pochon, C. Bird, G. Concepcion. From parent to gamete: Vertical transmission of Symbiodinium (Dinophyceae) in the scleractinian coral Montipora capitata. PLoS ONE - Accepted - Awaiting Publication
Gates R., M. Takabayashi, L.M. Adams, X. Pochon. 2012. Genetic Diversity of Free-Living Symbiodinium in Surface Water and Sediment of Hawai‘i and Florida. Coral Reefs 31(1): 157-167.. DOI:10.1007/s00338-011-0832-5 - Published
Gates R., E.C. Franklin, M. Stat, X. Pochon, H.M. Putnam. 2012. GeoSymbio: A hybrid, cloud-based web application of global geospatial bioinformatics and ecoinformatics for Symbiodinium-host symbioses. Molecular Ecology Resoources 12(2): 369-373.. DOI:10.1111/j.1755-0998.2011.03081.x - Published
Gates R., X. Pochon, H.M. Putnam, F. Burki. 2012. Identifying and Characterizing Alternative Molecular Markers for the Symbiotic and Free-Living Dinoflagellate Genus Symbiodinium. PLoS ONE 7(1): Article ID: e29816.. DOI:10.1371/journal.pone.0029816 - Published
Gates R., R.A. Briggs, J.L. Padilla-Gamino, R.R. Bidigare, K.C. Ruttenberg. Impact of Montipora capitata coral spawning events on Hawaiian coastal biogeochemistry. Limnology and Oceanography - Submitted - Under Review
Gates R., R. Toonen, D.J. Barshis, C. Birkenland, J.H. Stillman. Local adaptation in coral resilience to climate change. Proceedings of the Royal Society London Series B - Submitted - Under Review
Gates R., R. Toonen, M. Stat, A.C. Baker, D.G. Bourne, A.M.S. Correa, Z. Forsman, M.J. Huggett, X. Pochon, D. Skillings, C. Starger, M. vanOppen. 2012. Molecular delineation of species in the coral holobiont. Advances in Marine Biology 63: 1-66.. DOI:10.1016/B978-0-12-394282-1.00001-6 - Published
Gates R., J. Leong, R. Toonen, C.E. Farrar, Z. Forsman. 2013. Observing the Coral Symbiome Using Laser Scanning Confocal Microscopy. Science 339: 518.. DOI:10.1126/science.339.6119.518 - Published
Gates R., P.J. Edmunds, M. Adjeroud, M. Baskett, I.B. Baums, A. Budd, R.C. Carpenter, N. Fabina, T. Fan, E.C. Franklin, K. Gross, X. Han, et al. . Persistence of coral reefs through past and present climate change. Ecology Letters - Submitted - Under Review
Gates R., M.P. Lesser, M. Slattery, M. Stat, M. Ojimi, A. Grottoli. 2010. Photoacclimatization by the coral Montastraea cavernosa in the mesophotic Zone: Light, food, and genetics. Ecology 91(4): 990-1003.. DOI:10.1890/09-0313.1 - Published
Gates R., P.J. Edmunds and H.M. Putnam . Photophysiological consequences of vertical stratification of Symbiodinium in the tissues of Porites lutea. Biological Bulletin - Submitted - Under Review
Toonen R., R. Gates, D.J. Barshis, J.H. Stillman, L.W. Smith, C. Birkeland. 2010. Protein expression and genetic structure of the coral Porites lobata in an environmentally extreme Samoan back reef: does host genotype limit phenotypic plasticity?. Molecular Ecology 19(8): 1705-1720.. DOI:10.1111/j.1365-294X.2010.04574.x - Published
Gates R., E.C. Franklin, M. Stat, X. Pochon, H.M. Putnam. Proceedings Editors: M.B. Jones, C. Gries.. 2011. Rapid Development of a Hybrid Web Application for Synthesis Science of Symbiodinium with Google Apps. Proceedings of the Environmental Information Management Conference 2011 (EIM 2011): 44-48.. DOI:10.5060/D2NC5Z4X - Published
Gates R., C.V. Palmer. 2010. Skeletal Eroding Band in Hawaiian Corals. Coral Reefs 29(2): 469-469.. DOI:10.1007/s00338-010-0597-2 - Published
Gates R., J.L. Padilla-Gamino. 2012. Spawning dynamics in the Hawaiian reef-building coral Montipora capitata. Marine Ecology Progress Series 449: 145-160.. DOI:10.3354/meps09530 - Published
Gates R., J.L. Salerno, D.R. Reineman, M.S. Rappe. 2011. The effect of a sub-lethal temperature elevation on the structure of bacterial communities associated with the Coral Porites compressa. Journal of Marine Biology 2011: Article ID: 969173, 9 pages... DOI:10.1155/2011/969173 - Published
Gates R., G.E. Hofmann, J.P. Barry, P.J. Edmunds, D.A. Hutchins, T. Klinger and M.A. Sewell. 2010. The Effect of Ocean Acidification on Calcifying Organisms in Marine Ecosystems: An Organism-to-Ecosystem Perspective. Annual Reviews of Ecology, Evolution and Systematics 41: 127-147.. DOI:10.1146/annurev.ecolsys.110308.120227 - Published
Gates R., D.H. Green, P.J. Edmunds, X. Pochon. 2010. The effects of substratum type on the growth, mortality, and photophysiology of juvenile corals in St. John, US Virgin Islands. Journal of Experimental Marine Biology and Ecology 384(1-2): 18-29.. DOI:10.1016/j.jembe.2009.12.008 - Published
Gates R., T. D. Ainsworth, R. Vega Thurber. 2010. The Future of Coral Reefs - A Microbial Perspective. Trends in Ecology and Evolution 25(4): 233-240.. DOI:10.1016/j.tree.2009.11.001 - Published
Gates R., T.D. Ainsworth. 2011. The nature and taxonomic composition of coral symbiomes as drivers of performance limits in scleractinian corals. Journal of Experimental Marine Biology and Ecology 408(1-2): 94-101.. DOI:10.1016/j.jembe.2011.07.029 - Published
Gates R., H.M. Putnam, A.B. Mayfield, T.Y. Fan, C.S. Chan. The physiological and molecular responses of larvae from the reef-building coral Pocillopora damicornis exposed to near-future increases in temperature and pCO2. Marine Biology - Submitted - Under Review
Gates R., N.S. Fabina, H.M. Putnam, M. Stat, E.C. Franklin. Transmission mode predicts specificity and interaction patterns in coral-Symbiodinium communities. PLoS ONE - Submitted - Under Review
Gates R., R. Toonen, M. Takabayashi, M. Stat, C.E. Bird, X. Pochon, L. Chasqui, L.J. Chauka, G.T. Concepcion, D. Logan. 2011. Variation in Symbiodinium ITS2 sequence assemblages among coral colonies. Plos One 6(1): Article ID: e15854.. DOI:10.1371/journal.pone.0015854 - Published

NSF Fastlane Narrative

NWHI Research at HIMB (EPSCoR Core Contribution) 2010-2011

Research Project

Poster

Sogin E., R. Gates, Yung-Husan Chen, Li-Hsueh Wong, Tung-Yung Fan, Chii-Shiarng Chen, David Horgen . 10/07/2011. Using Metabolomics to investigate implications of diversity in coral-Symbiodinium unions .

Presentation

Current and Pending Support

Using metabolomics to investigate the impact of global climate change on functional different coral-symbiodinium unions - Awarded

Internet Dissemination

Coral Health Atlas

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Ruth Gates

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